DIVERSITY AND ANTIMICROBIAL ACTIVITY OF MANGROVE SOIL ACTINOMYCETES ISOLATED FROM TANJUNG LUMPUR, KUANTAN

Authors

  • Nurfathiah Abdul Malek Department of Biotechnology, Kulliyyah of Science, International Islamic University Malaysia, Malaysia
  • Zarina Zainuddin Department of Biotechnology, Kulliyyah of Science, International Islamic University Malaysia, Malaysia
  • Ahmed Jalal Khan Chowdhury Department of Marine Science and Technology, Kulliyyah of Science, International Islamic University Malaysia, Malaysia
  • Zaima Azira Zainal Abidin Department of Marine Science and Technology, Kulliyyah of Science, International Islamic University Malaysia, Malaysia

DOI:

https://doi.org/10.11113/jt.v77.6734

Keywords:

Diversity, mangrove, actinomycetes, Tanjung Lumpur, antimicrobial activity

Abstract

Actinomycetes are biotechnologically important for their unrivalled capacity to produce bioactive secondary metabolites. Although thousands of antibiotics have been discovered from actinomycetes, these represent only a small fraction of the entire reservoir. Thus, screening of actinomycetes from poorly studied environment is a valuable attempt. In the present study, an effort was made to isolate, identify and evaluate the antimicrobial activities of actinomycetes from Tanjung Lumpur Mangrove Forest of Pahang, Malaysia; an underexplored ecosystem. Out of 1366 actinomycetes that were successfully enumerated, a total of 40 representative isolates were selected for further evaluation. The antimicrobial activity of the representative isolates were first assessed using the cross streak method against Bacillus subtilis, Candida albicans, Escherichia coli, Serratia marcescens and Staphylococcus aureus. Twenty five isolates displayed antagonistic potential against at least one of the test organisms. Of this, 40% exhibited antibacterial activity, 24% exhibited antifungal activity and 36% displayed both. The cell–free supernatant of the active isolates were then further evaluated using the agar well diffusion method, in which only 4 isolates displayed inhibitory activity. A total of 13 representative isolates were identified and characterized using 16S rRNA gene partial sequencing. They were further classified into 7 genera namely Streptomyces, Micromonospora, Rhodococcus, Gordonia, Pseudonocardia, Mycobacterium and Actinophytocola. These findings suggested that mangrove of Tanjung Lumpur is a rich source of actinomycetes for the discovery of bioactive secondary metabolites.

References

Goodfellow, M. and Fiedler, H. P. 2010. A Guide to Successful Bioprospecting: Informed by Actinobacterial Systematics. Antonie Van Leeuwenhoek. 98(2): 119-142.

Demain, A. L. and Sanchez, S. 2009. Microbial Drug Discovery: 80 Years of Progress. Journal of Antibiotic. 62(1): 5-16.

Berdy, J. 2005. Bioactive Microbial Metabolites. Journal of Antibiotics. 58(1): 1-26.

Chaudhary, H. S., Soni, B., Shrivastava, A. R. and Shrivastava, S. 2013. Diversity and Versatiliy of Actinomycetes and Its Role in Antibiotic Production. Journal of Applied Pharmaceutical Science. 3(8): S83-S94.

Subramani, R. and Aalsberg, W. 2012. Marine Actinomycetes: An Ongoing Source of Novel Bioactive Metabolites. Microbiological Research. 167(10): 571-580.

Subramani, R. and Aalsberg, W. 2013. Culturable rare Actinomycetes: Diversity, Isolation and Marine Natural Product Discovery. Applied Microbiology and Biotechnology. 97: 9291-9321.

Tseng, M., Liao, C. H., Chiang, W. P. and Yuan, G. F. 2011. Isoptericola chiayiensis sp. nov. Isolated from Mangrove Soil. International Journal of Systematic Evolutionary and Microbiology 61(7): 1667-1670

Xie, Q. Y., Wong C., Wang, R., Qu, Z., Lin, H. P., Goodfellow, M. and Hong, K. 2011. Jishengilla endophytica gen. nov., sp. nov., a New Member of the Family Micromonosporaceae. International Journal of Syetematic Evolutionary and Microbiology. 61(5): 1153-1159.

Xie, Q., Lin, H., Li, L., Brown, R., Goodfellow, M., Deng, Z. and Hong, K. 2012. Verrucosisspora wenchangensis sp. nov., Isolated from Mangrove Soil. Antonie Van Leeuwenhoek. 102(1): 1-7.

Xie, Q. Y., Qu, Z., Lin. H. P., Li, L. and Hong, K. 2012. Micromonospora haikouensis sp.nov., Isolated from Mangrove Soil. Antonie van Leeuwenhoek. 101(3): 649-655.

Tang, Y. L., Lin, H. P., Xie, Q. Y., Li, L., Peng, F., Deng, Z. and Hong, K. 2013. Actinoallomurus acanthiterrae sp. nov., an Actinomycete Isolated fro Rhizosphere Soil of the Mangrove Plant Achantus ilicifolius. Internationational Journal of Systematic Evolutionary and Microbiology. 63(5): 1874-1879.

Ara, I., Bakir, M. A, Hozzein, W. N. and Kudo, T. 2013. Population, Morphological and Chemotaxonomical Characterization of Diverse Rare Actinomycetes in the Mangrove and Medicinal Plant Rhizosphere. African Journal of Microbiology Research. 7(16): 1480-1488.

Kamaruzzaman, Y., Nurul Nadia, M. Y., Noor Azhar, M. S., Ong, M. C., Shahbudin, S., Jalal, K. C. A. and Bidai, J. 2011. Heavy Metal Concentration in the Surface Sediment of Tanjung Lumpur. Sains Malaysiana. 40(2): 89-92.

Hong, K., Gao, A. H. Xie, Q. Y., Gao, H., Zhuang, L., Lin, H. P., Yu, H. P. Li, J., Yao, X. S., Goodfellow, M. and Ruan, J. S. 2009. Actinomycetes for Marine Drug Discovery Isolated ffrom Mangrove Soils and Plants in China. Marine Drugs. 7(1): 24-44.

Sweetline, C., Usha, R. and Palaniswamy, M. 2012. Antibacterial Activity of Actinomycetes from Pichavaram Mangrove of Tamil Nadu. Applied Journal of Hygiene. 1(2): 15-18.

Mangamuri, U. K., Muvva, V., Poda, S. and Kamma, S. 2012. Isolation, Identification and Molcular Characterization of Rare Actinomycetes from Mangrove Ecosystem of Nizampatnam. Malaysian Journal of Microbiology. 8(2): 83-91.

Wilson, K. H., Blitchington, R. B. and Greene, R. C. 1990. Amplification of Bacterial 16S Ribosomal DNA with Polymerase Chain Reeaction. Journal of Clinical Microbiology. 28(9): 1942-1946.

Ruan, L. X. and Huan, Y. 2012. Diversity and Biosynthetic Potential of Culturable Actinomycetes Associated with Marine Sponges in the China Seas. International Journal of Moecular Science. 13(5): 5917-5932.

Naikpatil, S. V. and Rathod, J. L. 2011. Selective Isolation and Antimicrobial Activity of Rare Actinomycetes from Mangrove Sediment of Karwar. Journal of Ecobiotechnology. 3(10): 48-53.

Carr, G., Derbyshire, E. R., Caldera, E., Currie, C. R. and Clardy, J. 2012. Antibiotic and Antimalarial Quinones from Fungus–growing Ant–associated Pseudonocardia sp. Journal of Natural Product. 75(10): 1806-1809.

Kurtboke, D. I. 2012. Biodiscovery from Rare Actinomycetes: An Eco–taxonomical Perspective. Applied Microbiology and Biotechnology. 93(5): 1843-1852.

Guo, C., Ke, L., Dang, Z. and Tam, N. F. 2011. Temporal Changes in Sphingomonas and Mycobacterium Populations in Mangrove Sediments Contaminated with Different Concentration of Polycylic Aromatic Hydrocabons (PAHs). Marine Pollution Bulletin. 62(1): 133-139.

Zhang, D. F., Zhang, Z., Zhang, X. M., Yang, L. L., Tian, X. P., Long, L. J., Zhang, S. and Li, W. J. 2014. Actinophytocola sediminis sp. nov., an Actinomycete Isolated from a Maride Sediment. International Journal of Systematic Evolutionary and Microbiology. 64(8): 2834-2840.

Idananda, C., Matsumoto, A. Inhashi, Y., Takahashi, Y., Duangmal, K. and Thamchaipenet, A. 2010. Actinophytocola oryzae gen. nov., sp. nov., Isolated from the Roots of Thai Glutinous Rice Plants, a New Member of the Family Pseudonocardiaceae. International Journal of Sytematic Evolutionary and Microbiology. 60(5): 1141-1146.

Ara, I., Tsetseg, B., Daram, D., Suto, M. and Ando, K. 2011. Actinophytocola burenkhanensis sp. nov., Isolated from Mongolian Soil. International Journal of Sytematic Evolutionary and Microbiology. 61(5): 1033-1038.

Otoguro, M., Yamamura, H., Tamura, T, Izaldi, R., Ratnakomala, S., Ridwan, R., Kartina, G., Triana, E., Nurkanto, A., Lestari, Y., Lisdiyanti, Y., Widyastuti, Y. and Ando, K. 2011. Actinophytocola timorensis sp. nov. and Actinophytocola corralina sp. nov. Isolated from Soil. International Journal of Scientific Evolutionari and Microbiology. 61(4): 834-838.

Guo, X., Qiu, D., Ruan, J. and Huang, Y. 2011. Actinophytocola xinjiangensis sp. nov., Isolated from Virgin Forest Soil. International Journal of Systematic Evolutionary and Mircobiology. 61(12): 2928-2932.

Sun, H. M., Zhang, T., Yu, L. Y., Mou, X. Z. and Zhang, Y. Q. 2014. Actinophytocola gilvus sp. nov., isoalted from desert soil crusts, and emended description of the genus Actinophytocola Indananda et al. 2010. International Journal of Systematic Evolutionary and Mircobiology. 64(9): 3120-3125.

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Published

2015-12-13

How to Cite

DIVERSITY AND ANTIMICROBIAL ACTIVITY OF MANGROVE SOIL ACTINOMYCETES ISOLATED FROM TANJUNG LUMPUR, KUANTAN. (2015). Jurnal Teknologi, 77(25). https://doi.org/10.11113/jt.v77.6734